Kiani, Narsis A: search on Z-Library

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1

Evaluating Network Inference Methods in Terms of Their Ability to Preserve the Topology and Complexity of Genetic Networks

Kiani, Narsis A., Zenil, Hector, Olczak, Jakub, Tegnér, Jesper

Journal:

Seminars in Cell & Developmental Biology

Year:

2016

Language:

english

File:

PDF, 1.58 MB

english, 2016

2

Causal deconvolution by algorithmic generative models

Zenil, Hector, Kiani, Narsis A., Zea, Allan A., Tegnér, Jesper

Journal:

Nature Machine Intelligence

Year:

2019

Language:

english

File:

PDF, 2.33 MB

english, 2019

3

[IEEE 2020 IEEE Congress on Evolutionary Computation (CEC) - Glasgow, United Kingdom (2020.7.19-2020.7.24)] 2020 IEEE Congress on Evolutionary Computation (CEC) - Evolving Neural Networks through a Reverse Encoding Tree

Zhang, Haoling, Yang, Chao-Han Huck, Zenil, Hector, Kiani, Narsis A., Shen, Yue, Tegner, Jesper N.

Year:

2020

File:

PDF, 2.99 MB

2020

4

An Algorithmic Information Calculus for Causal Discovery and Reprogramming Systems

Zenil, Hector, Kiani, Narsis A., Marabita, Francesco, Deng, Yue, Elias, Szabolcs, Schmidt, Angelika, Ball, Gordon, Tegnér, Jesper

Journal:

Year:

2019

Language:

english

File:

PDF, 7.00 MB

english, 2019

5

Dynamics and heterogeneity of brain damage in multiple sclerosis

Kotelnikova, Ekaterina, Kiani, Narsis A., Abad, Elena, Martinez-Lapiscina, Elena H., Andorra, Magi, Zubizarreta, Irati, Pulido-Valdeolivas, Irene, Pertsovskaya, Inna, Alexopoulos, Leonidas G., Olsson,

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 11.95 MB

english, 2017

6

A perspective on bridging scales and design of models using low-dimensional manifolds and data-driven model inference

Tegnér, Jesper, Zenil, Hector, Kiani, Narsis A., Ball, Gordon, Gomez-Cabrero, David

Journal:

Philosophical Transactions Mathematical Physical & Engineering Sciences

Year:

2016

Language:

english

File:

PDF, 435 KB

english, 2016

7

Systems Medicine: from molecular features and models to the clinic in COPD

Gomez-Cabrero, David, Menche, Jörg, Cano, Isaac, Abugessaisa, Imad, Huertas-Migueláñez, Mercedes, Tenyi, Akos, de Mas, Igor, Kiani, Narsis A, Marabita, Francesco, Falciani, Francesco, Burrowes, Kelly,

Journal:

Journal of Translational Medicine

Year:

2014

Language:

english

File:

PDF, 1.28 MB

english, 2014

8

A Review of Graph and Network Complexity from an Algorithmic Information Perspective

Zenil, Hector, Kiani, Narsis, Tegnér, Jesper

Journal:

Year:

2018

Language:

english

File:

PDF, 457 KB

english, 2018

9

Quantifying loss of information in network-based dimensionality reduction techniques

Zenil, Hector, Kiani, Narsis A., Tegnér, Jesper

Journal:

Journal of Complex Networks

Year:

2015

Language:

english

File:

PDF, 1.55 MB

english, 2015

10

MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells

Sumida, Noriyuki, Sifakis, Emmanouil G, Kiani, Narsis A, Ronnegren, AnnaÂ Lewandowska, Scholz, Barbara A, Vestlund, Johanna, Gomez-Cabrero, David, Tegner, Jesper, GÃ¶ndÃ¶r, Anita, Ohlsson, Rolf

Journal:

Nucleic Acids Research

Year:

2020

File:

PDF, 3.61 MB

2020

11

Symmetry and Correspondence of Algorithmic Complexity over Geometric, Spatial and Topological Representations

Zenil, Hector, Kiani, Narsis, Tegnér, Jesper

Journal:

Year:

2018

Language:

english

File:

PDF, 871 KB

english, 2018

12

A Review of Graph and Network Complexity from an Algorithmic Information Perspective

Zenil, Hector, Kiani, Narsis, Tegnér, Jesper

Journal:

Year:

2018

File:

PDF, 457 KB

2018

13

Normalizing for individual cell population context in the analysis of high-content cellular screens

Bettina Knapp, Ilka Rebhan, Anil Kumar, Petr Matula, Narsis A Kiani, Marco Binder, Holger Erfle, Karl Rohr, Roland Eils, Ralf Bartenschlager, Lars Kaderali

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 907 KB

english, 2011

14

Dynamic probabilistic threshold networks to infer signaling pathways from time-course perturbation data

Narsis A Kiani,Lars Kaderali

Journal:

BMC Bioinformatics

Year:

2014

Language:

english

File:

PDF, 622 KB

english, 2014

15

Exhaustion of CD4+ T-cells mediated by the Kynurenine Pathway in Melanoma

Rad Pour, Soudabeh, Morikawa, Hiromasa, Kiani, Narsis A., Yang, Muyi, Azimi, Alireza, Shafi, Gowhar, Shang, Mingmei, Baumgartner, Roland, Ketelhuth, Daniel F. J., Kamleh, Muhammad Anas, Wheelock, Crai

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 3.16 MB

english, 2019

16

[IEEE 2013 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Shanghai, China (2013.12.18-2013.12.21)] 2013 IEEE International Conference on Bioinformatics and Biomedicine - Algorithmic complexity of motifs clusters superfamilies of networks

Zenil, Hector, Kiani, Narsis A., Tegner, Jesper

Year:

2013

Language:

english

File:

PDF, 219 KB

english, 2013

17

Conditional Disease Development extracted from Longitudinal Health Care Cohort Data using Layered Network Construction

Kannan, Venkateshan, Swartz, Fredrik, Kiani, Narsis A., Silberberg, Gilad, Tsipras, Giorgos, Gomez-Cabrero, David, Alexanderson, Kristina, Tegnèr, Jesper

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.60 MB

english, 2016

18

Phosphatase inhibitor PPP1R11 modulates resistance of human T cells toward Treg‐mediated suppression of cytokine expression

Joshi, Rubin N., Fernandes, Sunjay Jude, Shang, Ming‐Mei, Kiani, Narsis A., Gomez‐Cabrero, David, Tegnér, Jesper, Schmidt, Angelika

Journal:

Journal of Leukocyte Biology

Year:

2019

File:

PDF, 1.79 MB

2019

19

Resource allocation for performance improvement

Nasim Nasrabadi, Akram Dehnokhalaji, Narsis A. Kiani, Pekka J. Korhonen, Jyrki Wallenius

Journal:

Annals of Operations Research

Year:

2012

Language:

english

File:

PDF, 395 KB

english, 2012

20

Low-algorithmic-complexity entropy-deceiving graphs

Zenil, Hector, Kiani, Narsis A., Tegnér, Jesper

Journal:

Physical Review E

Year:

2017

Language:

english

File:

PDF, 2.02 MB

english, 2017

21

Algorithmic Complexity and Reprogrammability of Chemical Structure Networks

Zenil, Hector, Kiani, Narsis A., Shang, Ming-mei, Tegnér, Jesper

Journal:

Parallel Processing Letters

Year:

2018

Language:

english

File:

PDF, 1.09 MB

english, 2018

22

Corrigendum to “Methods of information theory and algorithmic complexity for network biology” [Semin. Cell Dev. Biol. 51 (2016) 32–43]

Zenil, Hector, Kiani, Narsis A., Tegnér, Jesper

Journal:

Seminars in Cell & Developmental Biology

Year:

2016

Language:

english

File:

PDF, 72 KB

english, 2016

23

A minimal unified model of disease trajectories captures hallmarks of multiple sclerosis

Kannan, Venkateshan, Kiani, Narsis A., Piehl, Fredrik, Tegner, Jesper

Journal:

Mathematical Biosciences

Year:

2017

Language:

english

File:

PDF, 1.41 MB

english, 2017

24

Network modules uncover mechanisms of skeletal muscle dysfunction in COPD patients

Tényi, Ákos, Cano, Isaac, Marabita, Francesco, Kiani, Narsis, Kalko, Susana G., Barreiro, Esther, de Atauri, Pedro, Cascante, Marta, Gomez-Cabrero, David, Roca, Josep

Journal:

Journal of Translational Medicine

Year:

2018

Language:

english

File:

PDF, 3.04 MB

english, 2018

25

An Algorithmic Information Calculus for Causal Discovery and Reprogramming Systems

Zenil, Hector, Kiani, Narsis A., Marabita, Francesco, Deng, Yue, Elias, Szabolcs, Schmidt, Angelika, Ball, Gordon, Tegnér, Jesper

Journal:

Year:

2019

File:

PDF, 7.00 MB

2019

26

DEGENERACY IN FUZZY LINEAR PROGRAMMING AND ITS APPLICATION

SIGARPICH, LEILA ALIZADEH, ALLAHVIRANLOO, TOFIGH, LOTFI, FARHAD HOSSEINZADEH, KIANI, NARSIS AFTAB

Journal:

International Journal of Uncertainty Fuzziness and Knowledge-Based Systems

Year:

2011

Language:

english

File:

PDF, 194 KB

english, 2011

27

Methods of Information Theory and Algorithmic Complexity for Network Biology

Zenil, Hector, Kiani, Narsis A., Tegnér, Jesper

Journal:

Seminars in Cell & Developmental Biology

Year:

2016

Language:

english

File:

PDF, 1.34 MB

english, 2016

28

Time-resolved transcriptome and proteome landscape of human regulatory T cell (Treg) differentiation reveals novel regulators of FOXP3

Schmidt, Angelika, Marabita, Francesco, Kiani, Narsis A., Gross, Catharina C., Johansson, Henrik J., Éliás, Szabolcs, Rautio, Sini, Eriksson, Matilda, Fernandes, Sunjay Jude, Silberberg, Gilad, Ullah,

Journal:

Year:

2018

Language:

english

File:

PDF, 6.51 MB

english, 2018

29

A Decomposition Method for Global Evaluation of Shannon Entropy and Local Estimations of Algorithmic Complexity

Zenil, Hector, Hernández-Orozco, Santiago, Kiani, Narsis, Soler-Toscano, Fernando, Rueda-Toicen, Antonio, Tegnér, Jesper

Journal:

Year:

2018

Language:

english

File:

PDF, 2.01 MB

english, 2018

30

[IEEE 2015 11th International Conference on Signal-Image Technology & Internet-Based Systems (SITIS) - Bangkok, Thailand (2015.11.23-2015.11.27)] 2015 11th International Conference on Signal-Image Technology & Internet-Based Systems (SITIS) - Topological Evaluation of Methods for Reconstruction of Genetic Regulatory Networks

Olczak, Jakub, Kiani, Narsis A., Zenil, Hector, Tegner, Jesper

Year:

2015

Language:

english

File:

PDF, 478 KB

english, 2015

31

Combination of intravitreal bevacizumab and erythropoietin versus intravitreal bevacizumab alone for refractory diabetic macular edema: a randomized double-blind clinical trial

Entezari, Morteza, Flavarjani, Zahra Kiani, Ramezani, Alireza, Nikkhah, Humayon, Karimi, Saeed, Moghadam, Hamid Fateh, Daftarian, Narsis, Yaseri, Mehdi

Journal:

Graefe's Archive for Clinical and Experimental Ophthalmology

Year:

2019

Language:

english

File:

PDF, 189 KB

english, 2019

32

HiDi: An efficient reverse engineering schema for large scale dynamic regulatory network reconstruction using adaptive differentiation

Deng, Yue, Zenil, Hector, Tegnér, Jesper, Kiani, Narsis A.

Journal:

Year:

2017

Language:

english

File:

PDF, 571 KB

english, 2017

33

Immunometabolic Network Interactions of the Kynurenine Pathway in Cutaneous Malignant Melanoma

Rad Pour, Soudabeh, Morikawa, Hiromasa, Kiani, Narsis A., Gomez-Cabrero, David, Hayes, Alistair, Zheng, Xiaozhong, Pernemalm, Maria, LehtiÃ¶, Janne, Mole, Damian J., Hansson, Johan, Eriksson, Hanna, T

Journal:

Frontiers in Oncology

Year:

2020

File:

PDF, 942 KB

2020

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